Mugsy » History » Version 2

Gabriel Winckler, 04 Jul 2016 18:29

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h1. Mugsy
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h2. Envio local, exemplos de scripts
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Informações sobre o uso direto do cluster local estão em [[SLURM|aqui]].
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<pre>
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#!/bin/bash
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#SBATCH -t 5:00
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module load mugsy
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goo-job-nanny mugsy --directory . --prefix mugsy_serial mugsy_serial.fasta
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</pre>
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h2. Submissa Simplificada
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{{include(SubmissaoSimplificadaCabecalho)}}
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Exemplo:
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<pre>
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APP=mugsy
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CASE=case
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INPUT="genome1.fasta genome2.fasta genome3.fasta"
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QUEUE=short
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</pre>
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Defaults do template:
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* OUTPUT=$CASE.maf
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* PROGRESS=$CASE.stderr
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{{include(SubmissaoSimplificadaRodape)}}