Siesta » History » Version 5

Gabriel Winckler, 01 Jul 2016 14:11

1 2 Gabriel Winckler
h1. Siesta
2 1 Gabriel Winckler
3 2 Gabriel Winckler
h2. Envio local, exemplos de scripts
4 1 Gabriel Winckler
5 2 Gabriel Winckler
Informações sobre o uso direto do cluster local estão em [[SLURM|aqui]].
6 1 Gabriel Winckler
7 2 Gabriel Winckler
h3. Serial
8 2 Gabriel Winckler
9 2 Gabriel Winckler
<pre>
10 2 Gabriel Winckler
#!/bin/bash
11 3 Gabriel Winckler
#SBATCH -t 5:00
12 2 Gabriel Winckler
13 2 Gabriel Winckler
module load siesta
14 3 Gabriel Winckler
goo-job-nanny siesta < 32_h2o.fdf
15 2 Gabriel Winckler
</pre>
16 2 Gabriel Winckler
17 2 Gabriel Winckler
h3. MPI
18 2 Gabriel Winckler
19 2 Gabriel Winckler
<pre>
20 2 Gabriel Winckler
#!/bin/bash
21 3 Gabriel Winckler
#SBATCH -t 5:00 -n 16
22 2 Gabriel Winckler
23 2 Gabriel Winckler
module load siesta
24 3 Gabriel Winckler
export SHARED_FS=true
25 4 Gabriel Winckler
26 4 Gabriel Winckler
# If compiled with Intel MPI >= 4
27 4 Gabriel Winckler
#goo-job-nanny srun -n 16 siesta.mpi < ch4.fdf
28 4 Gabriel Winckler
# If compiled with Intel MPI < 4
29 4 Gabriel Winckler
goo-job-nanny mpirun -np 16 siesta.mpi < ch4.fdf
30 2 Gabriel Winckler
</pre>
31 2 Gabriel Winckler
32 2 Gabriel Winckler
h2. Submissa Simplificada
33 2 Gabriel Winckler
34 2 Gabriel Winckler
{{include(SubmissaoSimplificadaCabecalho)}}
35 1 Gabriel Winckler
36 1 Gabriel Winckler
Exemplo:
37 1 Gabriel Winckler
<pre>
38 1 Gabriel Winckler
APP=siesta
39 1 Gabriel Winckler
CASE=case
40 1 Gabriel Winckler
QUEUE=short
41 1 Gabriel Winckler
</pre>
42 1 Gabriel Winckler
43 1 Gabriel Winckler
Defaults do template:
44 1 Gabriel Winckler
* INPUT=$CASE.fdf
45 1 Gabriel Winckler
* PROGRESS=(stdout)
46 1 Gabriel Winckler
* OUTPUT=$CASE.*
47 1 Gabriel Winckler
48 1 Gabriel Winckler
49 1 Gabriel Winckler
{{include(SubmissaoSimplificadaRodape)}}